Relationship between four taxa

Relationship between four taxa

Usage

QuartetResolution(trees, tips)

Arguments

trees

A list of trees of class phylo, or a multiPhylo object.

tips

Vector specifying four tips whose relationship should be reported, in a format accepted by KeepTip().

Value

A vector specifying an integer, for each tree, which of tips[-1] is most closely related to tips[1].

See also

Other utility functions: ClusterStrings(), WhenFirstHit()

Examples

trees <- inapplicable.trees[["Vinther2008"]]
tips <- c("Lingula", "Halkieria", "Wiwaxia", "Acaenoplax")
QuartetResolution(trees, tips)
#>  [1] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 3 2 3 3 2 1 3 3 3 2 3 2 2 2
#> [39] 3 3 2 2 1 2 3 2 1 1 2 1 3 2 3 3 2 1 1 1 3 1 2 1 2 1 3 3 2 1 2 1 2 2 3