Sets up the dimensions of the dataset.

Provides initial dimensions for the dataset, which will constrain any input matrix supplied to Morphy.

Usage

mpl_init_Morphy(numtaxa, numchars, morphyobj)

Arguments

numtaxa

The number of taxa (or tips/terminals).

numchars

The number of characters (i.e. transformation series) in the data set.

morphyobj

An instance of the Morphy object.

Value

Morphy error code.

See also

Other Morphy API functions: GapHandler(), MorphyErrorCheck(), MorphyWeights(), PhyDat2Morphy(), SingleCharMorphy(), UnloadMorphy(), is.morphyPtr(), mpl_apply_tipdata(), mpl_attach_rawdata(), mpl_attach_symbols(), mpl_delete_Morphy(), mpl_delete_rawdata(), mpl_first_down_recon(), mpl_first_up_recon(), mpl_get_charac_weight(), mpl_get_gaphandl(), mpl_get_num_charac(), mpl_get_num_internal_nodes(), mpl_get_numtaxa(), mpl_get_symbols(), mpl_new_Morphy(), mpl_second_down_recon(), mpl_second_up_recon(), mpl_set_charac_weight(), mpl_set_num_internal_nodes(), mpl_set_parsim_t(), mpl_translate_error(), mpl_update_lower_root(), mpl_update_tip(), summary.morphyPtr()

Author

Martin Brazeau